Here are the related code and
data in the paper titled: "Which statistical
significance test best detects oncomiRNAs in cancer tissues? An exploratory
analysis". |
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The original miRNA-seq expression data were extrated from TCGA database; |
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Then we applied 6 methods (t-test, Limma, DESeq, edgeR, LRT and MARS) on
these 5 datasets, and got the every 6 results in csv format in every dataset;
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The miRNA in true class were obtained from two web1 and web2; |
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web2: HMDD
2.0 |
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Finally, we could get the performance(include ROC and AUC) of every dataset
through applying those 2 R codes If you have any questions about the above data, feel free to contact: Tang, Wei: wtang@tju.edu.cn |