Ren Qi, Quan Zou.Trends and Potential of Machine Learning and Deep Learning Techniques in Drug Study at Single-cell Level. Research, 2023, doi: 10.34133/research.0050. (SCI-1, IF 2022=11.036)
Ren Qi, Anjun Ma, Qin Ma, Quan Zou.Clustering and classification methods for single-cell RNA-sequencing data. Briefings in Bioinformatics, 2020, 21(4): 1196-1208. (SCI-1, IF 2020=11.622)
Ren Qi#, Jin Wu#, Fei Guo, Lei Xu, Quan Zou. A spectral clustering with self-weighted multiple kernel learning method for single-cell RNA-seq data. Briefings in Bioinformatics, 2021, 22(4), bbaa216. (SCI-1, IF 2021=11.622)
Ren Qi, Fei Guo, Quan Zou. String kernels construction and fusion: a survey with bioinformatics application.Frontiers of Computer Science, 2022, 16(6):166904. (SCI-2, IF 2022=2.061)
Pengfei Zhu, Ren Qi, Qinghua Hu, Qilong Wang, Changqing Zhang, Liu Yang. Beyond similar and dissimilar relations: a kernel regression formulation for metric learning.Twenty-Seventh International Joint Conference on Artificial Intelligence(IJCAI), 2018, doi:10.24963/ijcai.2018/450. (CCF-A)
Ren Qi, Arun Kumar Sangaiah, Dariusz Mrozek, Quan Zou. Machine Learning Techniques on Gene Function Prediction Volume II.Frontiers in Genetics, 2022, 13:949285. doi: 10.3389/fgene.2022.949285. (SCI-3, IF 2022=4.772)
Juexin Wang, Anjun Ma, Yuzhou Chang, Jianting Gong, Yuexu Jiang, Ren Qi, et al. scGNN: a novel graph neural network framework for single-cell RNA-Seq analyses.Nature Communications, 2021,12(1):1-11. (SCI-1, IF 2021=12.121)
Bin Yu, Chen Chen, Ren Qi, Ruiqing Zheng, Patrick J. Lawrence,et al. scGMAI: a Gaussian mixture model for clustering single-cell RNA-Seq data based on deep autoencoder. Briefings in Bioinformatics, 2021,22(4):bbaa316. (SCI-1, IF 2021=11.622)
Jing Jiang#, Cankun Wang#, Ren Qi, Hongjun Fu, Qin Ma. scREAD: a single-cell RNA-Seq database for Alzheimer's Disease. iScience, 2020,23(11):101769. (SCI-2, IF 2020=5.458)
Xiaolin Wang, Hongli Gao, Ren Qi, Ruiqing Zheng, Xin Gao, and Bin Yu. scBKAP: a clustering model for single-cell RNA-Seq data based on bisecting K-means.IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2022: 1-10. doi:10.1109/TCBB.2022.3230098. (TCBB, SCI-3, IF 2022=3.702)