Lesong Wei (魏乐松)

Publications

Lesong Wei, Xiucai Ye, Yuyang Xue, Tetsuya Sakurai, and Leyi Wei*. "ATSE: a peptide toxicity predictor by exploiting structural and evolutionary information based on graph neural network and attention mechanism." Briefings in Bioinformatics 22, no. 5 (2021): bbab041.
Lesong Wei, Xiucai Ye, Tetsuya Sakurai, Zengchao Mu, and Leyi Wei*. "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning." Bioinformatics 38, no. 6 (2022): 1514-1524. *ESI高被引*
Zhang Xin^†, Wei Lesong^†, Xiucai Ye, Kai Zhang, Saisai Teng, Zhongshen Li, Junru Jin, et al. SiameseCPP: A sequence-based Siamese network to predict cell-penetrating peptides by contrastive learning. Briefings in Bioinformatics, 2022.
Lesong Wei, Wentao Long, and Leyi Wei*. "MDL-CPI: Multi-view deep learning model for compound-protein interaction prediction." Methods (2022).
Lesong Wei, Xiucai Ye, and Tetsuya Sakurai*. "ToxinMI: improving peptide toxicity prediction by fusing multimodal information based on mutual information." In Proceedings of the Conference on Research in Adaptive and Convergent Systems, pp. 77-82. 2022.
Jiaqi Liao, Haoyang Chen, Lesong Wei*, and Leyi Wei*. "GSAML-DTA: An interpretable drug-target binding affinity prediction model based on graph neural networks with self-attention mechanism and mutual information." Computers in Biology and Medicine 150 (2022): 106145.
Haoyang Chen, Dahe Li, Jiaqi Liao, Lesong Wei*, and Leyi Wei*. "MultiscaleDTA: A multiscale-based method with a self-attention mechanism for drug-target binding affinity prediction." Methods 207 (2022): 103-109.
Xiao Yang, Xiucai Ye, Xuehong Li, and Lesong Wei*. "iDNA-MT: identification DNA modification sites in multiple species by using multi-task learning based a neural network tool." Frontiers in genetics 12 (2021): 663572.
Xiao Cao, Wenjia He, Zitan Chen, Yifan Li, Kexin Wang, Hongbo Zhang, Lesong Wei, Lizhen Cui, Ran Su*, and Leyi Wei*. "PSSP-MVIRT: peptide secondary structure prediction based on a multi-view deep learning architecture." Briefings in Bioinformatics 22, no. 6 (2021): bbab203.
Yuyang Xue, Xiucai Ye, Lesong Wei, Xin Zhang, Tetsuya Sakurai*, and Leyi Wei*. "Better Performance with Transformer: CPPFormer in the Precise Prediction of Cell-penetrating Peptides." Current Medicinal Chemistry 29, no. 5 (2022): 881-893.
Yitian Fang, Fan Xu, Lesong Wei, Yi Jiang, Jie Chen, Leyi Wei*, and Dong-Qing Wei*. "AFP-MFL: accurate identification of antifungal peptides using multi-view feature learning." Briefings in Bioinformatics (2023).
Xiaopeng Xu, Chencheng Xu, Wenjia He, Lesong Wei, Haoyang Li, Juexiao Zhou, Ruochi Zhang, Yu Wang, Yuanpeng Xiong*, and Xin Gao*. "HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer." Bioinformatics (2024): btae364.

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