PhD candidate Major:Computer Science and Technology Institute of Fundamental and Frontier Sciences University of Electronic Science and Technology of China Email: yaojiachen(at)std.uestc.edu.cn Address: Yangtze Delta Region Institute, Quzhou, Zhejiang, 324000 Advisor: Professor Quan Zou

Education

• Sep 2022 - Present: PhD candidate in Computer Science and Technology, University of Electronic Science and Technology of China, China

• Nov 2021 - Aug 2022: Research Assistant in Professor Zou’s lab, Yangtze Delta Region Institute(Quzhou)

• Sep 2017 - July 2020: Master in Software Engineering, Central South University

• Sep 2013 - July 2017: Bachelor in Software Engineering, NanChang HangKong University

Research

My research interests include

• Drug repurposing

• CircRNA

• Deep learning

Publications

• Yaojia Chen, Jiacheng Wang, Quan Zou, Mengting Niu, Yijie Ding, Jiangning Song, Yansu Wang. DrugDAGT: a dual-attention graph transformer with contrastive learning improves drug-drug interaction prediction. BMC Biology. 2024.22(1):233. (cite)

• Yaojia Chen, Jiacheng Wang, Chunyu Wang, Quan Zou. AutoEdge-CCP: A Novel Approach for Predicting Cancer-Associated CircRNAs and Drugs based on Automated Edge Embedding. PLOS Computational Biology. 2024.20(1):e1011851. (cite)

• Yaojia Chen, Mengting Niu, Yi Liu, Jiacheng Wang, Yijie Ding, Quan Zou. AAHLDMA: Predicting Drug-Microbe Associations Based on Bridge Graph Learning. International Conference on Intelligent Computing (2024). (cite)

• Yaojia Chen, Jiacheng Wang, Chunyu Wang, Mingxin Liu, Quan Zou. Deep learning models for disease-associated circRNA prediction: a review. Briefings in Bioinformatics. 2022, bbac364, https://doi.org/10.1093/bib/bbac364. (cite)

• Yaojia Chen, Yanpeng Wang, Yijie Ding, Xi Su, Chunyu Wang. RGCNCDA: Relational Graph Convolutional Network improve circRNA-disease associations prediction by incorporating microRNAs. Computers in Biology and Medicine.2022, 143:105322. (cite)

• Yaojia Chen, Yuxin Gong, Lijun Dou, Xun Zhou, Ying Zhang. Bioinformatics analysis methods for cell-free DNA. Computers in Biology and Medicine. 2022. 143:105283. (cite)

• Yaojia Chen, Liran Juan, Xiao Lv and Lei Shi. Bioinformatics Research on Drug Sensitivity Prediction. Frontiers in Pharmacology. 2021. 12:799712. (cite)